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Academic Journal

The landscape of chimeric RNAs in non-diseased tissues and cells.

  • Authors : Singh S; Department of Pathology, School of Medicine, University of Virginia, Charlottesville, VA 22908, USA.; Qin F

Subjects: Biomarkers*; Chimera/Chimera/Chimera/*genetics ; RNA/RNA/RNA/*genetics

  • Source: Nucleic acids research [Nucleic Acids Res] 2020 Feb 28; Vol. 48 (4), pp. 1764-1778.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Global N6-methyladenosine profiling of cobalt-exposed cortex and human neuroblastoma H4 cells presents epitranscriptomics alterations in neurodegenerative disease-associated genes.

  • Authors : Tang J; Fujian Key Lab of Environmental Factors and Cancer, School of Public Health, Fujian Medical University, China; Department of Preventive Medicine, School of Public Health, Fujian Medical University, China.

Subjects: Cobalt*/Cobalt*/Cobalt*/toxicity ; Neuroblastoma* ; Neurodegenerative Diseases*

  • Source: Environmental pollution (Barking, Essex : 1987) [Environ Pollut] 2020 Nov; Vol. 266 (Pt 2), pp. 115326. Date of Electronic Publication: 2020 Aug 15.Publisher: Elsevier Applied Science Publishers Country of Publication: England NLM ID: 8804476 Publication Model: Print-Electronic Cited Medium:

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Academic Journal

Predicting RNA secondary structure via adaptive deep recurrent neural networks with energy-based filter.

  • Authors : Lu W; School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiang, 215000, China.; Tang Y

Subjects: Neural Networks, Computer*; RNA/RNA/RNA/*chemistry; Base Pairing

  • Source: BMC bioinformatics [BMC Bioinformatics] 2019 Dec 24; Vol. 20 (Suppl 25), pp. 684. Date of Electronic Publication: 2019 Dec 24.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Circular RNA expression profiles in neonatal rats following hypoxic-ischemic brain damage.

  • Authors : Jiang L; Department of Pediatrics, Zhongda Hospital, Southeast University, Nanjing, Jiangsu 210097, P.R. China.; Li H

Subjects: Gene Expression Profiling*; Hypoxia-Ischemia, Brain/Hypoxia-Ischemia, Brain/Hypoxia-Ischemia, Brain/*genetics ; RNA/RNA/RNA/*genetics

  • Source: International journal of molecular medicine [Int J Mol Med] 2019 Apr; Vol. 43 (4), pp. 1699-1708. Date of Electronic Publication: 2019 Feb 26.Publisher: D.A. Spandidos Country of Publication: Greece NLM ID: 9810955 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

RNA Sequencing Analyses Reveal the Potential Mechanism of Pulmonary Injury Induced by Gallium Arsenide Particles in Human Bronchial Epithelioid Cells.

  • Authors : Ouyang Y; Beijing YouAn Hospital, Capital Medical University, Beijing Institute of Hepatology, Beijing, 100069, China.; Beijing Precision Medicine and Transformation Engineering Technology Research Center of Hepatitis and Liver Cancer, Beijing, 100069, China.

Subjects: Down-Regulation/Down-Regulation/Down-Regulation/*drug effects ; Gallium/Gallium/Gallium/*toxicity ; RNA/RNA/RNA/*metabolism

  • Source: Scientific reports [Sci Rep] 2020 May 26; Vol. 10 (1), pp. 8685. Date of Electronic Publication: 2020 May 26.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Concurrent Single-Cell RNA and Targeted DNA Sequencing on an Automated Platform for Comeasurement of Genomic and Transcriptomic Signatures.

  • Authors : Kong SL; Translational Research, Genome Institute of Singapore, Singapore; .

Subjects: Genomics*; High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/*methods ; RNA/RNA/RNA/*chemistry

  • Source: Clinical chemistry [Clin Chem] 2019 Feb; Vol. 65 (2), pp. 272-281. Date of Electronic Publication: 2018 Dec 06.Publisher: Oxford University Press Country of Publication: England NLM ID: 9421549 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Potential regulatory role of circular RNA in idiopathic pulmonary fibrosis.

  • Authors : Li R; Department of Respiratory Medicine, Affiliated Hospital of Binzhou Medical University, Binzhou, Shandong 256602, P.R. China.; Wang Y

Subjects: Idiopathic Pulmonary Fibrosis/Idiopathic Pulmonary Fibrosis/Idiopathic Pulmonary Fibrosis/*genetics ; Idiopathic Pulmonary Fibrosis/Idiopathic Pulmonary Fibrosis/Idiopathic Pulmonary Fibrosis/*metabolism ; MicroRNAs/MicroRNAs/MicroRNAs/*genetics

  • Source: International journal of molecular medicine [Int J Mol Med] 2018 Dec; Vol. 42 (6), pp. 3256-3268. Date of Electronic Publication: 2018 Sep 24.Publisher: D.A. Spandidos Country of Publication: Greece NLM ID: 9810955 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Circ_0056618 and CXCR4 act as competing endogenous in gastric cancer by regulating miR-206.

  • Authors : Li H; Department of General Surgery, The First Affiliated Hospital of Henan University of Science and Technology, Luoyang, China.; Yao G

Subjects: MicroRNAs/MicroRNAs/MicroRNAs/*metabolism ; RNA/RNA/RNA/*metabolism ; Receptors, CXCR4/Receptors, CXCR4/Receptors, CXCR4/*metabolism

  • Source: Journal of cellular biochemistry [J Cell Biochem] 2018 Nov; Vol. 119 (11), pp. 9543-9551. Date of Electronic Publication: 2018 Aug 20.Publisher: Wiley-Liss Country of Publication: United States NLM ID: 8205768 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Homogeneous and universal transduction of various nucleic acids to an off-shelf device based on programmable toehold switch sensing.

  • Authors : Tang Y; State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, China. .; Li H

Subjects: Biosensing Techniques*; DNA/DNA/DNA/*analysis ; RNA/RNA/RNA/*analysis

  • Source: Chemical communications (Cambridge, England) [Chem Commun (Camb)] 2020 Feb 25; Vol. 56 (16), pp. 2483-2486.Publisher: Royal Society of Chemistry Country of Publication: England NLM ID: 9610838 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Drosophila YBX1 homolog YPS promotes ovarian germ line stem cell development by preferentially recognizing 5-methylcytosine RNAs.

  • Authors : Zou F; Harbin Institute of Technology, 150001 Heilongjiang, China.; Department of Biology, Southern University of Science and Technology of China, 518055 Guangdong, China.

Subjects: 5-Methylcytosine/5-Methylcytosine/5-Methylcytosine/*metabolism ; DNA-Binding Proteins/DNA-Binding Proteins/DNA-Binding Proteins/*metabolism ; Drosophila Proteins/Drosophila Proteins/Drosophila Proteins/*metabolism

  • Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2020 Feb 18; Vol. 117 (7), pp. 3603-3609. Date of Electronic Publication: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet

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Academic Journal

Functional heritage: the evolution of chimeric RNA into a gene.

  • Authors : Wu H; Department of Gastrointestinal Surgery, The Third Xiangya Hospital of Central South University, Changsha, Hunan, China.; Department of Pathology, School of Medicine, University of Virginia, Charlottesville, VA, USA.

Subjects: Evolution, Molecular* ; Genes* ; Recombination, Genetic*

  • Source: RNA biology [RNA Biol] 2020 Jan; Vol. 17 (1), pp. 125-134. Date of Electronic Publication: 2019 Sep 29.Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101235328 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

The PERK Pathway Plays a Neuroprotective Role During the Early Phase of Secondary Brain Injury Induced by Experimental Intracerebral Hemorrhage.

  • Authors : Zhang J; Department of Neurosurgery and Brain and Nerve Research Laboratory, The First Affiliated Hospital of Soochow University, Suzhou, China.; Zhang P

Subjects: Brain Injuries*/Brain Injuries*/Brain Injuries*/metabolism ; Cerebral Hemorrhage*/Cerebral Hemorrhage*/Cerebral Hemorrhage*/metabolism ; RNA*

  • Source: Acta neurochirurgica. Supplement [Acta Neurochir Suppl] 2020; Vol. 127, pp. 105-119.Publisher: Springer-Verlag Country of Publication: Austria NLM ID: 100962752 Publication Model: Print Cited Medium: Print ISSN: 0065-1419 (Print)

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Academic Journal

CircFUT10 reduces proliferation and facilitates differentiation of myoblasts by sponging miR-133a.

  • Authors : Li H; Shaanxi Key Laboratory of Molecular Biology for Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, P.R. China.; Yang J

Subjects: Cell Differentiation* ; Cell Proliferation* ; Muscle Development*

  • Source: Journal of cellular physiology [J Cell Physiol] 2018 Jun; Vol. 233 (6), pp. 4643-4651. Date of Electronic Publication: 2018 Jan 15.Publisher: Wiley-Liss Country of Publication: United States NLM ID: 0050222 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

CircRNA circ_0067934 silencing inhibits the proliferation, migration and invasion of NSCLC cells and correlates with unfavorable prognosis in NSCLC.

  • Authors : Wang J; Department of Thoracic surgery, Beijing Friendship Hospital, Capital Medical University, Xuanwu, Beijing, China. .; Li H

Subjects: Carcinoma, Non-Small-Cell Lung/Carcinoma, Non-Small-Cell Lung/Carcinoma, Non-Small-Cell Lung/*genetics ; Carcinoma, Non-Small-Cell Lung/Carcinoma, Non-Small-Cell Lung/Carcinoma, Non-Small-Cell Lung/*mortality ; Cell Movement/Cell Movement/Cell Movement/*genetics

  • Source: European review for medical and pharmacological sciences [Eur Rev Med Pharmacol Sci] 2018 May; Vol. 22 (10), pp. 3053-3060.Publisher: Verduci Country of Publication: Italy NLM ID: 9717360 Publication Model: Print Cited Medium: Internet ISSN: 2284-0729 (Electronic)

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Academic Journal

3dRPC: a web server for 3D RNA-protein structure prediction.

  • Authors : Huang Y; Institute of Biophysics, School of Physics, Huazhong University of Science and Technology, Wuhan, Hubei 430074, China.; Li H

Subjects: Molecular Docking Simulation* ; Software*; Computational Biology/Computational Biology/Computational Biology/*methods

  • Source: Bioinformatics (Oxford, England) [Bioinformatics] 2018 Apr 01; Vol. 34 (7), pp. 1238-1240.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

The Hierarchy of Proinflammatory Cytokines in Ocular Inflammation.

  • Authors : Da Cunha AP; a Department of Ophthalmology , Novartis Institutes for Biomedical Research , Cambridge , Massachusetts , USA.; Zhang Q

Subjects: Gene Expression Regulation*; Cytokines/Cytokines/Cytokines/*genetics ; Endophthalmitis/Endophthalmitis/Endophthalmitis/*genetics

  • Source: Current eye research [Curr Eye Res] 2018 Apr; Vol. 43 (4), pp. 553-565. Date of Electronic Publication: 2017 Dec 04.Publisher: Informa Healthcare Country of Publication: England NLM ID: 8104312 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

A RNA-Targeted Two-Photon Bioprobe with High Selective Permeability into Nuclear Pore Complexes for Dynamically Tracking the Autophagy Process among Multi-Organelles.

  • Authors : Zhang H; College of Chemistry and Chemical Engineering , Anhui University and Key Laboratory of Functional Inorganic Materials Chemistry of Anhui Province, Anhui Province Key Laboratory of Chemistry for Inorganic/Organic Hybrid Functionalized Materials, Key Laboratory of Structure and Performance of Functional Hybrid Materials of Ministry of Education , 230601 , Hefei , P.R. China.; Zhu X

Subjects: Photons*; Biosensing Techniques/Biosensing Techniques/Biosensing Techniques/*methods ; Fluorescent Dyes/Fluorescent Dyes/Fluorescent Dyes/*metabolism

  • Source: Analytical chemistry [Anal Chem] 2019 Dec 03; Vol. 91 (23), pp. 14911-14919. Date of Electronic Publication: 2019 Nov 20.Publisher: American Chemical Society Country of Publication: United States NLM ID: 0370536 Publication Model: Print-Electronic Cited Medium: Internet

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Academic Journal

Comprehensive circRNA expression profile and construction of circRNA-associated ceRNA network in fur skin.

  • Authors : Zhu Z; College of Life Sciences, Shanxi Agricultural University, Taigu, China.; Li Y

Subjects: Melanocytes*; Hair Color/Hair Color/Hair Color/*genetics ; RNA/RNA/RNA/*analysis

  • Source: Experimental dermatology [Exp Dermatol] 2018 Mar; Vol. 27 (3), pp. 251-257.Publisher: Munksgaard Country of Publication: Denmark NLM ID: 9301549 Publication Model: Print Cited Medium: Internet ISSN: 1600-0625

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Academic Journal

Statistical modeling of RNA structure profiling experiments enables parsimonious reconstruction of structure landscapes.

  • Authors : Li H; Department of Biomedical Engineering and Genome Center, University of California at Davis, Davis, CA, 95616, USA.; Aviran S

Subjects: Models, Chemical* ; Models, Statistical* ; Molecular Structure*

  • Source: Nature communications [Nat Commun] 2018 Feb 09; Vol. 9 (1), pp. 606. Date of Electronic Publication: 2018 Feb 09.Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Heat stress alters genome-wide profiles of circular RNAs in Arabidopsis.

  • Authors : Pan T; CAS Center for Excellence in Molecular Plant Sciences, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.; Ministry of Education, Key Laboratory for Bio-Resource and Eco-Environment, College of Life Science, State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu, 610064, China.

Subjects: Gene Expression Regulation* ; Genome, Plant*; Arabidopsis/Arabidopsis/Arabidopsis/*genetics

  • Source: Plant molecular biology [Plant Mol Biol] 2018 Feb; Vol. 96 (3), pp. 217-229. Date of Electronic Publication: 2017 Nov 24.Publisher: Kluwer Academic Country of Publication: Netherlands NLM ID: 9106343 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Exploiting the application of l-aptamer with excellent stability: an efficient sensing platform for malachite green in fish samples.

  • Authors : Luo X; Guangdong Provincial Key Laboratory of Construction and Detection in Tissue Engineering, Guangdong Provincial Key Laboratory of Medical Image Processing, Biomaterials Research Center, School of Biomedical Engineering, Southern Medical University, Guangzhou 510515, China. Department of Chemistry, University of Washington, Washington 98195, USA.; Chen Z

Subjects: Aptamers, Nucleotide/Aptamers, Nucleotide/Aptamers, Nucleotide/*chemistry ; Food Contamination/Food Contamination/Food Contamination/*analysis ; RNA/RNA/RNA/*chemistry

  • Source: The Analyst [Analyst] 2019 Jul 21; Vol. 144 (14), pp. 4204-4209. Date of Electronic Publication: 2019 Jun 12.Publisher: Royal Society of Chemistry Country of Publication: England NLM ID: 0372652 Publication Model: Print-Electronic Cited Medium: Internet

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Academic Journal

Cas6 processes tight and relaxed repeat RNA via multiple mechanisms: A hypothesis.

  • Authors : Sefcikova J; Institute of Molecular Biophysics, Florida State University, Tallahassee, FL, USA.; Roth M

Subjects: CRISPR-Cas Systems* ; Nucleic Acid Conformation*; Endoribonucleases/Endoribonucleases/Endoribonucleases/*metabolism

  • Source: BioEssays : news and reviews in molecular, cellular and developmental biology [Bioessays] 2017 Jun; Vol. 39 (6). Date of Electronic Publication: 2017 May 11.Publisher: Wiley Country of Publication: United States NLM ID: 8510851 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1521-1878

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Academic Journal

Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-Based Regulation of Transcription.

  • Authors : Xiao R; Department of Cellular and Molecular Medicine, Institute of Genomic Medicine, University of California, San Diego, La Jolla, CA 92093, USA; Medical Research Institute, Wuhan University, Wuhan, Hubei 430071, China. Electronic address: .

Subjects: Chromatin/Chromatin/Chromatin/*metabolism ; RNA/RNA/RNA/*metabolism ; RNA-Binding Proteins/RNA-Binding Proteins/RNA-Binding Proteins/*metabolism

  • Source: Cell [Cell] 2019 Jun 27; Vol. 178 (1), pp. 107-121.e18.Publisher: Cell Press Country of Publication: United States NLM ID: 0413066 Publication Model: Print Cited Medium: Internet ISSN: 1097-4172

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Academic Journal

Anti-inflammatory Activity of MTL-CEBPA, a Small Activating RNA Drug, in LPS-Stimulated Monocytes and Humanized Mice.

  • Authors : Zhou J; Department of Molecular and Cellular Biology, Beckman Research Institute, City of Hope, Duarte, CA 91010, USA.; Li H

Subjects: CCAAT-Enhancer-Binding Proteins/CCAAT-Enhancer-Binding Proteins/CCAAT-Enhancer-Binding Proteins/*genetics ; Inflammation/Inflammation/Inflammation/*therapy ; Monocytes/Monocytes/Monocytes/*drug effects

  • Source: Molecular therapy : the journal of the American Society of Gene Therapy [Mol Ther] 2019 May 08; Vol. 27 (5), pp. 999-1016. Date of Electronic Publication: 2019 Feb 26.Publisher: Cell Press Country of Publication: United States NLM ID: 100890581 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Exosome circRNA secreted from adipocytes promotes the growth of hepatocellular carcinoma by targeting deubiquitination-related USP7.

  • Authors : Zhang H; Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin's Clinical Research Center for Cancer, Tianjin, 300060, China.; Deng T

Subjects: Adipocytes/Adipocytes/Adipocytes/*pathology ; Carcinoma, Hepatocellular/Carcinoma, Hepatocellular/Carcinoma, Hepatocellular/*genetics ; Cell Proliferation/Cell Proliferation/Cell Proliferation/*genetics

  • Source: Oncogene [Oncogene] 2019 Apr; Vol. 38 (15), pp. 2844-2859. Date of Electronic Publication: 2018 Dec 13.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 8711562 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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